STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CV_0955Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx. (98 aa)    
Predicted Functional Partners:
nuoN
NADH-ubiquinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.
       0.795
CV_4387
Probable cytochrome c-type biogenesis protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1333.
  
     0.775
nrfE
Cytochrome C-type biogenesis transmembrane protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0477/TC:9.B.14.1.2.
  
     0.774
nuoM
NADH-ubiquinone oxidoreductase, chain M; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1008/TC:3.D.1.3.1.
       0.738
CV_0626
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG3308.
  
     0.694
CV_0565
Hypothetical protein.
 
     0.684
CV_1990
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0542.
  
     0.658
CV_4235
Probable (S)-2-hydroxy-acid oxidase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0247.
  
     0.620
nuoL
NADH-ubiquinone oxidoreductase, chain L; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1009/TC:3.D.1.2.1.
       0.618
CV_4257
Probable thioredoxin; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0526.
  
     0.576
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.