STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flgMNegative regulator of flagellin synthesis; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2747. (99 aa)    
Predicted Functional Partners:
fliA1
RNA polymerase sigma factor for flagellar operon; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.
  
 0.997
fliA2
RNA polymerase sigma factor for flagellar operon; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1191; Belongs to the sigma-70 factor family.
  
 0.996
fliS2
Flagellar protein FliS; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1516.
  
 
 0.967
CV_3875
Probable flagellar protein FliS; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1516.
  
 
 0.967
CV_1001
Hypothetical protein.
  
  
 0.959
CV_0999
Probable flagella basal body P-ring formation protein flgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.
  
  
 0.928
CV_2645
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1366.
   
 
  0.902
CV_3444
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1366.
   
 
  0.902
fliD
Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.901
CV_2986
Hypothetical protein.
     
  0.900
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.