Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CV_1165Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2606. (239 aa)    
Predicted Functional Partners:
CV_1166
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx.
       0.773
gst1
Glutathione S-transferase family protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0625.
       0.550
fimD
Outer membrane usher protein precursor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG3188/TC:1.B.11.3.1.
  
     0.525
ecpD
Chaperone protein ecpD precursor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG3121.
  
 
   0.509
CV_1878
Probable ATP-binding component of a transport system; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/TC:1.B.12.2.1.
  
     0.436
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.