STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgsACDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/COG0558; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (193 aa)    
Predicted Functional Partners:
cdsA
Phosphatidate cytidylyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/COG0575; Belongs to the CDS family.
 
 
 0.949
pgpA
Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
 
  
 0.945
cinA
cinA-related protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1546; Belongs to the CinA family.
 
  
 0.944
pssA
CDPdiacylglycerol-serine O-phosphatidyltransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1502.
    
 0.929
cdh
CDPdiacylglycerol diphosphatase; Identified by sequence similarity; putative; ORF located using Blastx/COG2134.
     
 0.907
CV_3539
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1426.
  
    0.882
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
 
 
 
 0.814
folD
Methylenetetrahydrofolate dehydrogenase/cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
  
  
 0.790
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
     
 0.702
CV_2075
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1058.
  
  
 0.657
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.