STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CV_1330Probable enoyl-CoA hydratase protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1024. (262 aa)    
Predicted Functional Partners:
CV_1764
Probable propionyl-CoA carboxylase (beta subunit); Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0825/TC:3.B.1.1.2.
 0.963
mvaB
hydroxymethylglutaryl-CoA lyase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0119/TC:3.B.1.1.1.
 0.961
CV_1762
Probable acyl-coA carboxylase subunit; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0439/TC:3.B.1.1.2.
 
 0.929
CV_1763
Probable enoyl-CoA hydratase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1024.
  
  
 
0.910
atoB
acetyl-CoA C-acetyltransferase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0183; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.805
fadA
acetyl-CoA C-acyltransferase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0183; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.805
phaA
acetyl-CoA C-acetyltransferase; Involved in the production of polyhydroxyalkonic acids (PHAs), composed primarily of 3-hydroxybutyric acid (3HB) and 3- hydroxyvaleric acid (3HV); Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.805
catF
Beta-ketoadipyl CoA thiolase; Identified by sequence similarity; putative; ORF located using Blastx/COG0183; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.805
CV_3503
Probable sensor/response regulator hybrid; Identified by sequence similarity; putative; ORF located using Blastx/COG0784.
    
 
 0.790
CV_1766
Probable isovaleryl-CoA dehydrogenase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1960.
 
 0.782
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.