STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
entCIsochorismate synthase EntC / MenF; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1169. (392 aa)    
Predicted Functional Partners:
entB
Isochorismatase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1535.
 
 0.999
entE
2,3-dihydroxybenzoate-AMP ligase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1021/TC:9.B.17.1.4.
  
 0.998
entF
Enterobactin synthetase component F; Identified by sequence similarity; putative; ORF located using Blastx/COG1020.
  
 0.994
CV_3716
Hypothetical protein.
  
 
 0.988
entA
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1028.
 
  
 0.980
pabA
Anthranilate synthase (component II); Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0512.
 
 
 0.972
cbsF
Synthetase CbsF; Identified by sequence similarity; putative; ORF located using Blastx/COG0365/TC:9.B.17.1.4.
 
  
 0.972
CV_2802
Probable peptide synthetase protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1020.
 
  
 0.944
pheA
Chorismate mutase/prephenate dehydratase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1605.
  
 
 0.917
tyrB1
Aromatic-amino-acid transaminase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1448.
     
 0.901
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.