Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CV_1544Hypothetical protein. (300 aa)    
Predicted Functional Partners:
CV_1545
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1233.
       0.773
CV_1543
Hypothetical protein.
       0.741
CV_1542
Hypothetical protein.
  
  
 0.735
CV_1546
Probable 3-oxoacyl-[acyl-carrier protein] reductase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1028.
       0.693
CV_0660
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG3176.
  
     0.677
CV_1541
Probable 3-oxoacyl-[acyl-carrier-protein] synthase II; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0304; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.651
CV_4323
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2045; Belongs to the ComB family.
  
     0.645
CV_0865
Probable dipeptidyl aminopeptidase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1073; Belongs to the UPF0255 family.
  
     0.600
fdxA2
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.571
CV_1403
Probable secreted protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0654.
  
     0.570
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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