STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ansAIdentified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0252. (331 aa)    
Predicted Functional Partners:
aspA
Aspartate ammonia-lyase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1027.
 
 
 0.975
CV_4047
Probable L-asparaginase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1446.
    
 0.917
CV_0113
Probable aspartate/glutamate racemace protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1794.
    
 0.916
pyrB
Aspartate carbamoyltransferase catalytic chain; Identified by sequence similarity; putative; ORF located using Blastx/COG0540; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
  
  0.916
CV_0797
Probable asparagine synthase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0367.
     
 0.916
asnB
Asparagine synthetase, glutamine-hydrolysing; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0367.
     
 0.916
CV_3959
Probable asparagine synthetase B; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0367.
     
 0.916
pyrI
Aspartate carbamoyltransferase; Involved in allosteric regulation of aspartate carbamoyltransferase.
  
  
  0.911
argG
Argininosuccinate synthase; Identified by sequence similarity; putative; ORF located using Blastx/COG0137; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 
 0.909
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
   
 
 0.908
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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