Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CV_1769Probable resistance protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0477/TC:2.A.1.11.1. (407 aa)    
Predicted Functional Partners:
CV_1770
Probable two-component transcriptional regulator; Identified by sequence similarity; putative; ORF located using Blastx/COG3279.
 
   
 0.785
CV_1771
Probable sensor kinase protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0642.
 
   
 0.774
narG
Respiratory nitrate reductase alpha chain; Identified by sequence similarity; putative; ORF located using Blastx/COG0243; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.731
CV_0768
Probable outer membrane multidrug resistance lipoprotein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1538.
  
   
 0.710
CV_3014
Probable transmembrane transport protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0477.
      
 0.644
CV_0766
Probable multidrug resistance protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0477/TC:2.A.1.3.2; Belongs to the major facilitator superfamily.
      
 0.642
CV_3317
Probable ABC transporter protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0747/TC:3.A.1.5.4.
  
     0.628
CV_0913
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2990.
  
     0.579
narJ
Nitrate reductase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2180.
  
  
 0.567
pcaK
4-hydroxybenzoate transporter; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0477/TC:2.A.1.15.1.
      
 0.566
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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