Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gstRgstR-like transcriptional regulator protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0583; Belongs to the LysR transcriptional regulatory family. (299 aa)    
Predicted Functional Partners:
CV_3257
Probable transcriptional regulator LysR family; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.681
CV_0218
Probable transcriptional activator; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.658
CV_1772
Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.643
CV_3289
Probable transcriptional regulator, LysR family; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.594
CV_2566
Probable peroxide-inducible genes activator; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.573
CV_1883
Probable transcriptional regulator, LysR family; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.506
lysR-2
Transcriptional activator protein LysR; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.472
CV_3665
Probable transcriptional regulator; Identified by sequence similarity; putative; ORF located using Blastx/COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.458
CV_0764
Probable transcriptional regulator, LysR family; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.424
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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