Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CV_1902Probable hydrolase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1335. (183 aa)    
Predicted Functional Partners:
CV_1905
Probable transcription regulator; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0693.
    0.943
CV_4239
Probable amidase from nicotinamidase family; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1335.
  
     0.750
CV_1904
Probable transmembrane protein, DMT Superfamily; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0697/TC:2.A.7.3.2.
 
     0.609
CV_1901
Probable transport protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1280/TC:2.A.76.1.1.
       0.527
nnrE
Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair o [...]
  
    0.518
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)]; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0240; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
   0.478
CV_1903
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx.
       0.412
CV_2218
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0596.
  
 
 0.409
nadE
Glutamine-dependent NAD+ synthetase signal peptide protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.404
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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