Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
fliWHypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. (147 aa)    
Predicted Functional Partners:
flaG
Flagellin protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1334.
  
  
 0.895
fliC1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.873
fliC2
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.855
fliC3
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.850
flgL1
Flagellar hook-associated protein 3; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1344.
 
 
 0.849
flgL2
Flagellar hook-associated protein 3; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1344.
  
 
 0.826
flaD
Flagellin D; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.819
CV_3875
Probable flagellar protein FliS; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1516.
 
  
 0.809
fliM
Flagellar motor switch protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1868.
 
  
 0.804
flgK1
Flagellar hook-associated protein 1; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1256.
  
  
 0.779
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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