Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
argIOrnithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. (307 aa)    
Predicted Functional Partners:
argG
Argininosuccinate synthase; Identified by sequence similarity; putative; ORF located using Blastx/COG0137; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
 
 0.998
carB
Carbamoyl-phosphate synthase large chain; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0458; Belongs to the CarB family.
 
 
 0.995
carA
Carbomyl phosphate synthetase small subunit; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0505; Belongs to the CarA family.
 
 
 0.995
arcA
Arginine deiminase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2235.
 
 0.994
argJ
Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
 
 
 0.992
arcC
Carbamate kinase; Identified by sequence similarity; putative; ORF located using Blastx/COG0549; Belongs to the carbamate kinase family.
 
 
 0.989
aruC
Acetylornithine transaminase; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG0160; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
 0.971
argH
Argininosuccinate lyase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0165.
  
 0.955
argE
Acetylornithine deacetylase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0624.
  
 
 0.942
arcB
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
  
 
0.915
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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