STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aniANitrite reductase; Identified by sequence similarity; putative; ORF located using Blastx/COG2132; Belongs to the multicopper oxidase family. (492 aa)    
Predicted Functional Partners:
norB
Nitric oxide reductase, subunit B; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG3256/TC:3.D.4.5.1.
 
  
 0.979
CV_2009
Hypothetical protein.
 
   
 0.967
CV_2008
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1262.
 
     0.952
napA
Nitrate reductase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0243/TC:5.A.3.2.1; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.938
narH
Nitrate reductase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1140.
    
 0.927
narG
Respiratory nitrate reductase alpha chain; Identified by sequence similarity; putative; ORF located using Blastx/COG0243; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.926
nasA
Nitrate/nitrite transporter; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2223/TC:2.A.1.8.2.
    
 0.917
narK2
Nitrite extrusion protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2223.
    
 0.917
narK1
Nitrite extrusion protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2223.
    
 0.917
CV_3907
Probable nitrite extrusion protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2223.
    
 0.917
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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