fit to screen
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CV_2103Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx. (605 aa)    
Predicted Functional Partners:
CV_0181
Probable response regulator; Identified by sequence similarity; putative; ORF located using Blastx.
 
    0.620
CV_2102
Probable hydrolase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1473.
       0.596
CV_3941
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
 
  
 0.591
CV_0689
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx.
  
     0.532
CV_0182
Probable response regulator; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0457.
  
     0.526
CV_0024
Probable hydroxyethylthiazole kinase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0739.
  
   
 0.515
lolA
Outer membrane lipoproteins carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
  
 0.492
vacJ
Lipoprotein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2853.
    
 
 0.464
CV_1618
Probable oxidoreductase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx.
  
    0.464
CV_3262
Probable oxidoreductase protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0021.
  
    0.464
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.