STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbsFSynthetase CbsF; Identified by sequence similarity; putative; ORF located using Blastx/COG0365/TC:9.B.17.1.4. (2859 aa)    
Predicted Functional Partners:
CV_2232
Probable MbtH-like protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG3251.
 
 
 0.999
entB
Isochorismatase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1535.
 
  
 0.994
hetM
Polyketide synthase; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG3320.
  
 0.990
fes
Enterochelin esterase; Identified by sequence similarity; putative; ORF located using Blastx/COG2382.
 
  
 0.983
CV_0461
Probable cytochrome P-450; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2124.
 
 
 0.978
CV_1939
Hypothetical protein.
  
 
 0.974
CV_2656
Probable cytochrome P450 hydroxylase; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG2124; Belongs to the cytochrome P450 family.
  
 
 0.974
entC
Isochorismate synthase EntC / MenF; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1169.
 
  
 0.972
entD
Enterobactin synthetase component D; Identified by sequence similarity; putative; ORF located using Blastx/COG2977; Belongs to the P-Pant transferase superfamily.
 
  
 0.971
entE
2,3-dihydroxybenzoate-AMP ligase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1021/TC:9.B.17.1.4.
 
  
0.969
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.