STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CV_2237Probable POT family transport protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0477/TC:2.A.1.38.1. (425 aa)    
Predicted Functional Partners:
fes
Enterochelin esterase; Identified by sequence similarity; putative; ORF located using Blastx/COG2382.
 
     0.776
fepB
Ferrienterobactin-binding periplasmic protein precursor; Identified by sequence similarity; putative; ORF located using Blastx/COG0614.
 
     0.769
cbsF
Synthetase CbsF; Identified by sequence similarity; putative; ORF located using Blastx/COG0365/TC:9.B.17.1.4.
 
   
 0.751
fepG
Enterobactin-iron transport system permease protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0609/TC:3.A.1.14.2; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.732
fepC
Enterobactin-iron transport system ATP-binding protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1120.
 
     0.712
entB
Isochorismatase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1535.
 
     0.664
fepD
Enterobactin-iron transport system permease protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0609/TC:3.A.1.14.2; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.652
CV_2232
Probable MbtH-like protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG3251.
 
     0.520
CV_0245
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG3214.
 
     0.488
fepA
Enterobactin-iron outermembrane receptor protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1629/TC:1.B.14.7.1.
  
     0.482
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.