Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CV_2293Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG3568. (407 aa)    
Predicted Functional Partners:
CV_2292
Hypothetical protein.
       0.558
osmB
Osmotically inducible lipoprotein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx.
  
  
 0.515
CV_3543
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0508.
  
    0.501
CV_2516
Probable colicin V production protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1286.
  
    0.471
CV_3999
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG3087.
  
    0.464
CV_4144
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx.
   
    0.463
CV_4039
Probable phosphatidylglycerol phosphate synthetase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1502.
  
    0.429
CV_4276
Probable glutamate-cysteine ligase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx.
 
     0.424
CV_0656
Probable hemolysin; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2823.
 
    0.419
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
  
 0.416
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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