Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
frwBPTS system, fructose-like-2 IIB component 1; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1445/TC:4.A.2.1.1. (97 aa)    
Predicted Functional Partners:
frwC
protein-N p-phosphohistidine-sugar phosphotransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1299/TC:4.A.2.1.1.
   
 0.992
fruB
Phosphotransferase system; Identified by sequence similarity; putative; ORF located using Blastx/COG1925.
 
  
 0.976
fruK
1-phosphofructokinase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1105; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.973
ptsA
Phosphoenolpyruvate-protein phosphotransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1925/TC:8.A.7.1.1.
 
  
 0.962
CV_0980
Probable phosphoenolpyruvate-protein phosphotransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1925/TC:8.A.7.1.1.
 
  
 0.887
CV_0558
Probable phosphoenolpyruvate-protein phosphotransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1925/TC:8.A.7.1.1.
 
  
 0.879
CV_3334
Probable PTS system, fructose-specific IIABC componen; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1762.
 
  
 0.813
manA
Mannose-6-phosphate isomerase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1482.
  
  
 0.776
treB
protein-N p-phosphohistidine-sugar phosphotransferase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1264/TC:4.A.1.2.4.
  
  
 0.727
CV_0241
Probable pts system, nitrogen regulatory IIA component; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1762.
 
  
 0.718
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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