Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CV_2317Probable ribosomal-protein-alanine acetyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/COG1670. (182 aa)    
Predicted Functional Partners:
CV_2338
Probable ribosomal-protein-alanine N-acetyltransferase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1670.
  
     0.650
CV_1288
Probable ribosomal-protein-serine acetyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/COG1670.
  
     0.623
CV_2918
Probable ribosomal protein N-acetyltransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1670.
  
     0.606
CV_1289
Probable ribosomal-protein-serine acetyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/COG1670.
  
     0.589
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.543
CV_2318
Hypothetical protein.
       0.420
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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