Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mglASugar ABC transporter, ATP-binding protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1129. (509 aa)    
Predicted Functional Partners:
CV_2349
Probable ABC transporter, permease protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1079; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
CV_2350
Probable sugar ABC transporter, permease protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1079/TC:3.A.1.2.2; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
CV_2347
Probable membrane lipoprotein; Identified by sequence similarity; putative; ORF located using Blastx/COG1744.
 
 0.995
CV_2467
Probable membrane lipoprotein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1744.
 
 0.991
rbsC
D-ribose transport system permease protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1172/TC:3.A.1.2.1; Belongs to the binding-protein-dependent transport system permease family.
 
     0.925
livM
Leucine/isoleucine/valine transport system permease protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0559/TC:3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
 
      0.748
CV_2458
Probable ABC transport system, permease protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0842.
 
      0.748
CV_2457
Probable ABC superfamily, transport protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0842/TC:3.A.1.102.1.
 
      0.729
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
 
  
 0.473
moeA
Molybdopterin biosynthesis moeA protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
       0.400
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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