Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CV_2359Probable uracil-DNA glycosylase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1573. (193 aa)    
Predicted Functional Partners:
CV_2357
Hypothetical protein.
       0.773
CV_2358
Probable phospho-2-dehydro-3-deoxyheptonate aldolase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2876.
       0.773
CV_2356
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1611; Belongs to the LOG family.
       0.772
pheA
Chorismate mutase/prephenate dehydratase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1605.
       0.751
CV_2360
Probable Dioxygenase related to 2-nitropropane dioxygenase; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG2070.
       0.659
CV_3452
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1214.
  
    0.589
CV_2354
Probable hydrolase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0596.
       0.475
ssb
Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
   
 
 0.473
prc
Carboxy-terminal processing protease; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0793; Belongs to the peptidase S41A family.
  
    0.459
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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