Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mxcBIron-chelator utilization protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2375. (266 aa)    
Predicted Functional Partners:
entB
Isochorismatase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1535.
 
  
 0.950
entE
2,3-dihydroxybenzoate-AMP ligase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1021/TC:9.B.17.1.4.
 
  
 0.915
CV_2465
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1695.
 
   
 0.914
CV_3897
Probable hemin degrading factor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx.
 
    0.748
CV_0068
Probable colicin V secretion atp-binding protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2274/TC:3.A.1.110.2.
   
   0.703
CV_0307
Probable ABC transporter, ATP-binding/permease fusion; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2274/TC:3.A.1.109.1.
   
   0.703
hlyB
Identified by sequence similarity; putative; ORF located using Blastx/COG2274/TC:3.A.1.109.1.
   
   0.703
cydC
ATP-binding/permease fusion ABC transporter; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2274/TC:3.A.1.109.1.
   
   0.703
CV_4400
Probable colicin V secretion ABC transporter ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2274.
   
   0.703
entF
Enterobactin synthetase component F; Identified by sequence similarity; putative; ORF located using Blastx/COG1020.
 
  
 0.684
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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