Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
anmKConserved hypothetical protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. (360 aa)    
Predicted Functional Partners:
CV_3092
Probable phosphoglycolate phosphatase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0546.
     
 0.904
dgkA
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
 
      0.835
CV_2477
Probable Peptidase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0739.
 
    0.785
CV_0259
Probable glycosyl hyrolase, family 3; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1472.
 
   
 0.615
ftsK
Cell division ftsk transmembrane protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1674/TC:3.A.12.1.2.
       0.615
nagZ
Probable beta-N-acetylhexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
 
   
 0.610
hemH
Ferrochelatase, protoheme ferro-lyase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
       0.562
nagA
N-acetylglucosamine-6-phosphate deacetylase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1820.
 
   
 0.485
recJ
Exodeoxyribonuclease VII; Identified by sequence similarity; putative; ORF located using Blastx/COG0608.
       0.461
CV_2476
Probable signal peptide protein; Identified by sequence similarity; putative; ORF located using Blastx.
       0.461
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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