STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CV_2491Probable aldehyde dehydrogenase (NAD); Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1012; Belongs to the aldehyde dehydrogenase family. (475 aa)    
Predicted Functional Partners:
CV_2490
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0542.
 
   
 0.850
CV_2489
Probable glucose-methanol-choline oxidoreductase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2303.
 
  
 0.747
CV_3407
Probable prephenate dehydrogenase; Identified by sequence similarity; putative; ORF located using Blastx/COG0287.
      
 0.697
ohr1
Organic hydroperoxide resistance protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1764.
      0.677
CV_2728
Probable alcohol dehydrogenase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1454.
 
 
 0.645
CV_1448
Probable glutamine synthetase; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG0174; Belongs to the glutamine synthetase family.
  
  
 0.513
CV_2024
Probable glutamine synthetase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0174; Belongs to the glutamine synthetase family.
  
  
 0.513
CV_4298
Probable glutamine synthetase; Identified by sequence similarity; putative; ORF located using Blastx/COG0174; Belongs to the glutamine synthetase family.
  
  
 0.513
maeB
NADP-dependent malate dehydrogenase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0281.
  
  
 0.510
CV_0190
Probable glyceraldehyde 3-phosphate dehydrogenase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0057; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.491
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.