Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
narXTransmembrane nitrate/nitrite sensor kinase transcription regulator protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0642. (632 aa)    
Predicted Functional Partners:
narL
Nitrate/nitrite response regulator protein narL; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2197.
 0.998
narJ
Nitrate reductase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2180.
 
   
 0.841
narK1
Nitrite extrusion protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2223.
 
  
 0.822
narP
Nitrate/nitrite response regulator protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2197.
 
 
 0.807
CV_1869
Probable two-component response regulator, LuxR family; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2197.
 
 
 0.781
rcsB
Capsula synthesis response regulator transcription regulator protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2197.
 
 
 0.760
CV_0305
Probable two-component response regulator; Identified by sequence similarity; putative; ORF located using Blastx/COG2197.
 
 
 0.755
CV_2599
Probable two-component response regulator, LuxR family; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2197.
 
 
 0.748
CV_1521
Probable two-component sensor; Identified by sequence similarity; putative; ORF located using Blastx/COG0642.
  
     0.715
CV_2087
Probable transcriptional regulator, MerR family; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0789.
      
 0.661
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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