Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CV_2656Probable cytochrome P450 hydroxylase; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG2124; Belongs to the cytochrome P450 family. (468 aa)    
Predicted Functional Partners:
entF
Enterobactin synthetase component F; Identified by sequence similarity; putative; ORF located using Blastx/COG1020.
  
 
 0.908
cbsF
Synthetase CbsF; Identified by sequence similarity; putative; ORF located using Blastx/COG0365/TC:9.B.17.1.4.
  
 
 0.908
CV_2802
Probable peptide synthetase protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1020.
  
 
 0.908
polA
DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.823
CV_0461
Probable cytochrome P-450; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2124.
  
   
 0.672
CV_1403
Probable secreted protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0654.
 
 
 0.646
CV_1774
Probable flavohemoprotein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1018.
  
 0.604
CV_4372
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG3000.
  
 
 0.592
vioC
vioC monooxygenase; Catalyzes the hydroxylation of the 16-position of protoviolaceinate and protodeoxyviolaceinate to form violacein and deoxyviolacein, respectively.
 
 
 0.586
CV_1826
Probable FAD-dependent monooxygenase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0654.
 
 
 0.584
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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