STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CV_2728Probable alcohol dehydrogenase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1454. (377 aa)    
Predicted Functional Partners:
adhC
Alcohol dehydrogenase class III; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1062; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.982
adhE
Acetaldehyde dehydrogenase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1454; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
0.940
aldB
Aldehyde dehydrogenase (NAD); Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1012; Belongs to the aldehyde dehydrogenase family.
 
 0.939
pflA
Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.
 
  
 0.705
CV_2025
Probable aminotransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0161.
     
 0.702
rtn
Rtn like protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2200.
      
 0.682
CV_2491
Probable aldehyde dehydrogenase (NAD); Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1012; Belongs to the aldehyde dehydrogenase family.
 
 
 0.645
pflB
Formate C-acetyltransferase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1882.
  
  
 0.537
kbl
Glycine C-acetyltransferase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
    
 0.533
CV_2729
Probable multiple antibiotic resistance protein MarC; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2095/TC:9.B.10.1.1.
       0.514
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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