Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CV_2729Probable multiple antibiotic resistance protein MarC; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2095/TC:9.B.10.1.1. (233 aa)    
Predicted Functional Partners:
CV_3706
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2095/TC:9.B.10.1.2.
  
   
 0.787
lysP
Lysine-specific permease; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0833/TC:2.A.3.1.2.
       0.522
CV_2728
Probable alcohol dehydrogenase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1454.
       0.508
aefA
Transmembrane protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0668/TC:1.A.23.1.1.
  
    0.445
CV_4288
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0668/TC:1.A.23.2.1.
  
    0.445
CV_2330
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0668/TC:1.A.23.4.2.
  
    0.442
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.