STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tauBTaurine ATP-binding component of a transport system; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. (261 aa)    
Predicted Functional Partners:
tauC
Taurine transport system permease protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0600/TC:3.A.1.17.1.
 
 0.999
tauA
Taurine transport system substrate-binding protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0715/TC:3.A.1.17.1.
 
 0.999
tauD
Taurine dioxygenase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2175.
 
 0.995
CV_0804
Probable taurine dioxygenase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2175.
 
  0.977
CV_2291
Probable ABC transporter permease protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0600/TC:3.A.1.17.1.
  
 0.957
cysW
Sulfate transport system permease protein CysW; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0555/TC:3.A.1.6.1.
 
      0.892
oppD
Oligopeptide transport system ATP-binding protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0444/TC:3.A.1.5.1; Belongs to the ABC transporter superfamily.
 
    
0.847
CV_4396
Probable ABC transporter, permease protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0577.
 
      0.846
dppD
Probable ATP-binding component of ABC transporter; Identified by sequence similarity; putative; ORF located using Blastx/COG0444; Belongs to the ABC transporter superfamily.
 
    
0.804
modB
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.630
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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