STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CV_2863Hypothetical protein. (111 aa)    
Predicted Functional Partners:
vioB
VioB - polyketide synthase; Catalyzes the hydrogen peroxide-dependent dimerization of two L-tryptophan-derived molecules (imine form of indole 3-pyruvate (IPA)), to form an uncharacterized product suggested to be indole-3-pyruvate imine dimer that can spontaneously convert into dichlorochromopyrrolate (CPA). The uncharacterized product is the substrate of VioE.
  
 
 0.906
petA
Ubiquinol-cytochrome c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.906
petB
Ubiquinol-cytochrome c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.880
CV_1173
Probable cytochrome-c oxidase, subunit II; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2993.
  
 
 0.863
coxC
Cytochrome-c oxidase, subunit III; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1845/TC:3.D.4.7.1.
  
 
 0.858
cyoC
Cytochrome o ubiquinol oxidase, subunit III; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1845/TC:3.D.4.5.1.
  
 
 0.858
aniA
Nitrite reductase; Identified by sequence similarity; putative; ORF located using Blastx/COG2132; Belongs to the multicopper oxidase family.
  
 
 0.847
CV_1174
Probable cytochrome-c oxidase, subunit I; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG3278/TC:3.D.4.3.1; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.845
norB
Nitric oxide reductase, subunit B; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG3256/TC:3.D.4.5.1.
  
 
 0.835
fdoH
Formate dehydrogenase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0437/TC:5.A.3.2.1.
  
 
 0.773
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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