STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CV_2995Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0419. (143 aa)    
Predicted Functional Partners:
fliH
Flagellar assembly protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1317.
       0.798
fliG2
Flagellar motor switch protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1536.
       0.796
fliI2
Flagellum-specific ATP synthase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1157.
       0.792
fliF2
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
       0.639
fliD
Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
       0.552
fliE-2
Probable flagellar hook-basal body complex protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1677.
       0.528
fliS2
Flagellar protein FliS; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1516.
       0.509
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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