Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CV_3010Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx. (164 aa)    
Predicted Functional Partners:
CV_3009
Probable sensor/response regulator hybrid; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0642.
       0.763
ibeB
Outer membrane drug efflux lipoprotein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1538/TC:1.B.17.3.5.
      
 0.645
argR
Transcriptional regulator (AraC-type DNA-binding domain-containing proteins); Identified by sequence similarity; putative; ORF located using Blastx/COG0693.
      
 0.645
cspE
Cold shock transcription regulator protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1278.
      
 0.641
nadA
Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
      
 0.641
flaD
Flagellin D; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
       0.445
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.