STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysMCysteine synthase B; Identified by sequence similarity; putative; ORF located using Blastx/COG0031; Belongs to the cysteine synthase/cystathionine beta- synthase family. (296 aa)    
Predicted Functional Partners:
cysE
Serine O-acetyltransferase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1045.
 
 0.988
cysS
cysteinyl-tRNA synthetase; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG0215; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.902
CV_4125
Probable acetyltransferase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0110.
  
 
 0.761
cysD
Sulfate adenylyltransferase subunit 2; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0175.
  
  
 0.721
moaD
Molybdopterin-converting factor subunit 1; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1977.
  
 
 0.718
cysI
Sulfite reductase hemoprotein, beta subunit; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0155.
 
  
 0.659
CV_3394
Probable cystathionine gamma-lyase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0626.
 
 
 0.639
metB
Cystathionine gamma-synthase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0626.
 
 
 0.633
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
 
 0.622
cysC
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
  
  
 0.618
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.