Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CV_3140Probable protein-tyrosine-phosphatase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0394; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (125 aa)    
Predicted Functional Partners:
kdsB
3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
      0.841
trxC
Thioredoxin 2; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG0526; Belongs to the thioredoxin family.
  
 
 0.735
trxA
Thioredoxin; Identified by sequence similarity; putative; ORF located using Blastx/COG0526; Belongs to the thioredoxin family.
  
 
 0.735
CV_3141
Hypothetical protein.
       0.664
arsB
Arsenic resistance membrane protein ArsB/ACR3; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0798/TC:2.A.59.1.1.
  
  
 0.637
CV_3139
Probable protein-glutamate methylesterase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2201.
       0.620
CV_3138
Probable two-component response regulator; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2204.
       0.587
fliE
Flagellar hook-basal body complex protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1677.
       0.564
rbn
Ribonuclease BN; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1295.
  
  
 0.557
engB
GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
  
    0.525
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.