Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fadLLong-chain fatty acid transport protein precursor; Identified by sequence similarity; putative; ORF located using Blastx/COG2067/TC:1.B.9.1.1. (445 aa)    
Predicted Functional Partners:
comL
Competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
 
 0.802
bamA
Probable outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 
 0.799
CV_2715
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1752.
   
 
 0.746
CV_0705
Probable FkbP-type peptidyl-prolyl cis-trans isomerase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0545.
    
 
 0.698
fkpA
Fkbp-type peptidyl-prolyl cis-trans isomerase fkpA precursor; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0545.
    
 
 0.698
CV_3791
Probable FkbP-type peptidyl-prolyl cis-trans isomerase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0545.
    
 
 0.698
fadB
3-hydroxyacyl-CoA dehydrogenase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1024.
 
  
 0.693
plsC
1-acylglycerol-3-phosphate O-acyltransferase; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG0204.
      
 0.657
plsY
Conserved hypothetical protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
      
 0.651
plsX
Fatty acid/phospholipid biosynthesis protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
      
 0.648
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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