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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
osmBOsmotically inducible lipoprotein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx. (73 aa)    
Predicted Functional Partners:
tolB
TolB protein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.811
ompH
Outer membrane protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2825; Belongs to the skp family.
  
 
 0.708
CV_0818
Probable glycosyltransferase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0463.
   
  
 0.692
CV_3166
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0056.
   
    0.669
CV_1355
Probable transcriptional regulator protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0789.
   
    0.654
CV_3208
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0204.
       0.546
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
   0.544
dgt
dGTPase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0232.
  
    0.539
motB2
Chemotaxis motB protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1360/TC:1.A.30.1.1.
  
 
 
 0.481
CV_2293
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG3568.
  
  
 0.481
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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