Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CV_3219Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx. (152 aa)    
Predicted Functional Partners:
CV_3220
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx; Belongs to the UPF0753 family.
 
     0.679
CV_3218
Probable translation initiation protein, Sua5/YciO/YrdC family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.487
CV_3221
Probable NADH-ubiquinone oxidoreductase, chain L; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1009/TC:3.D.1.1.1.
       0.473
chaA
Calcium/proton antiporter; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0387/TC:2.A.19.1.1.
   
    0.457
acrE
Probable RND efflux membrane fusion protein precursor; identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0845/TC:8.A.1.6.1; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.431
CV_2642
Probable membrane protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0670/TC:9.B.24.2.1; Belongs to the BI1 family.
   
    0.423
CV_3932
Probable CopG protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG3019.
   
    0.402
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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