Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nagDN-acetylglucosamine metabolism protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0647; Belongs to the HAD-like hydrolase superfamily. (315 aa)    
Predicted Functional Partners:
cmk
Cytidylate kinase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0283.
  
 
  0.938
CV_0572
Hypothetical protein.
  
 
 0.922
cpdB
2`,3`-cyclic-nucleotide 2`-phosphodiesterase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0737; Belongs to the 5'-nucleotidase family.
  
 
 0.920
ushA
UDP-sugar diphosphatase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0737; Belongs to the 5'-nucleotidase family.
  
 
 0.920
CV_3083
Probable UDP-sugar diphosphatase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0737; Belongs to the 5'-nucleotidase family.
  
 
 0.920
purH
Phosphoribosylaminoimidazolecarboxamide formyltransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0138.
    
  0.918
icc
3',5'-cyclic-nucleotide phosphodiesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
  
  0.915
dgt
dGTPase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0232.
   
 
  0.914
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
    
  0.912
udk
Uridine kinase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0572.
    
 0.906
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.