Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CV_3278Probable cytochrome b561; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG3038. (180 aa)    
Predicted Functional Partners:
CV_3277
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2353; Belongs to the UPF0312 family.
  
 0.997
CV_3276
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2353; Belongs to the UPF0312 family.
 
  
 0.968
CV_3275
Probable sphingomyelinase/beta-hemolysin; Identified by sequence similarity; putative; ORF located using Blastx.
     
 0.766
CV_3266
Hypothetical protein.
      
 0.646
tatB
Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
      
 0.526
CV_1411
Probable nitrite transport protein; Identified by sequence similarity; putative; ORF located using Blastx/TC:2.A.44.3.1.
      
 0.494
CV_3279
Hypothetical protein.
       0.462
trpF
Phosphoribosylanthranilate isomerase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0135; Belongs to the TrpF family.
      
 0.418
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.