Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
CV_3379Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx. (93 aa)    
Predicted Functional Partners:
oxyR
Hydrogen peroxide-inducible genes activator; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0583; Belongs to the LysR transcriptional regulatory family.
  
    0.569
minD
Septum site-determining protein minD; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2894.
  
    0.568
minE
Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
       0.568
dcp1
Peptidyl-dipeptidase Dcp; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0339.
       0.543
minC
Cell division inhibitor; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
       0.525
dcp2
Probable peptidyl-dipeptidase Dcp; Identified by sequence similarity; putative; ORF located using Blastx/COG0339.
       0.421
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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