STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tehBTellurite resistance protein; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG0500. (226 aa)    
Predicted Functional Partners:
coq7
Conserved hypothetical protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 0.816
CV_3284
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0500.
 
   
 0.624
CV_2001
Probable microbial collagenase; Identified by sequence similarity; putative; ORF located using Blastx.
  
     0.589
CV_1178
Probable periplasmic binding protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0747.
  
     0.523
CV_1570
Probable chelatase protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1239.
  
 
 0.506
ubiF
Monooxygenase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0654.
   
 0.491
CV_1403
Probable secreted protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0654.
   
 0.491
CV_1826
Probable FAD-dependent monooxygenase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0654.
   
 0.491
visC
Oxidoreductase protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0654.
   
 0.491
ubiH
2-octaprenyl-6-methoxyphenol hydroxylase oxidoreductase protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0654.
   
 0.491
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.