Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nfsAOxygen-insensitive NADPH nitroreductase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0778; Belongs to the flavin oxidoreductase frp family. (246 aa)    
Predicted Functional Partners:
ribF
Riboflavin kinase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0196; Belongs to the ribF family.
    
 0.916
CV_1555
Probable oxidoreductase protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0778.
 
  
  0.913
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
     
  0.900
birA
Biotin acetyl-CoA-carboxylase synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.724
nemA1
Flavoprotein NADH-dependent oxidoreductase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1902.
  
  
 0.685
CV_3499
Probable transcriptional regulator, TetR family; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1309.
     
 0.561
CV_3708
Probable thiol peroxidase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2077.
      
 0.502
CV_0438
Probable transmenbrane protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0842/TC:3.A.1.102.1.
  
  
 0.499
CV_2457
Probable ABC superfamily, transport protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0842/TC:3.A.1.102.1.
  
  
 0.499
CV_2458
Probable ABC transport system, permease protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0842.
  
  
 0.499
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.