Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CV_3526Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1858. (428 aa)    
Predicted Functional Partners:
acpA
Acid phosphatase; Identified by sequence similarity; putative; ORF located using Blastx.
 
     0.892
CV_2525
Probable transmembrane protein; Identified by sequence similarity; putative; ORF located using Blastx/COG3391.
  
 
 0.742
CV_4286
Probable acid phosphatase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx.
 
     0.741
CV_3527
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0346.
       0.590
CV_3166
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0056.
  
     0.485
aniA
Nitrite reductase; Identified by sequence similarity; putative; ORF located using Blastx/COG2132; Belongs to the multicopper oxidase family.
  
  
 0.484
CV_3165
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx.
  
     0.467
hemN
Oxygen-independent coproporphyrinogen III oxidase; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG0635; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
   
  
 0.458
chrB
Chromate resistance signal peptide protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx.
  
     0.452
CV_3837
Probable multidrug efflux membrane protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0845/TC:8.A.1.2.1; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.448
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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