STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtgAPeptidoglycan glycosyltransferase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. (228 aa)    
Predicted Functional Partners:
mrdA
Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.
 
 
 0.985
ftsI
Penicillin-binding protein 3 precursor; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.
 
 
 0.976
dacC
D-ala-D-ala-carboxypeptidase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1686; Belongs to the peptidase S11 family.
  
 
 0.960
mrcA
Peptidoglycan glycosyltransferase; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG0744.
 
 
0.954
dacB
Serine-type D-Ala-D-Ala carboxypeptidase; Identified by sequence similarity; putative; ORF located using Blastx/COG2027.
  
  
 0.938
pbpB
Penicillin-binding protein 2; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG0744.
  
  
0.923
aroE
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
  
  
 0.825
pbpG
D-alanyl-D-alanine-endopeptidase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1686; Belongs to the peptidase S11 family.
 
  
 0.687
CV_0488
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/TC:1.A.4.1.1.
    
 
 0.679
CV_3543
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0508.
    
 
 0.679
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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