Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
glnGNitrogen assimilation regulatory response regulator/transcription regulator protein; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (470 aa)    
Predicted Functional Partners:
ntrB
Two-component sensor NtrB; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0642.
 0.997
rpoN
RNA polymerase N (sigma54) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.824
gltB
Glutamate synthase, large subunit; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0069.
      
 0.760
glnA
Glutamine synthetase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0174.
  
  
 0.752
CV_0841
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2199.
  
 
 0.722
gltD
Glutamate synthase, small subunit; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0493.
  
   
 0.686
fleN
Flagellar synthesis regulator FleN; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0455.
  
 
 0.681
glnK
Nitrogen regulatory protein P-II-2; Identified by sequence similarity; putative; ORF located using Blastx/COG0347; Belongs to the P(II) protein family.
   
 
 0.669
amtB
Ammonium transporter; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0004/TC:2.A.49.1.1.
   
  
 0.668
CV_1448
Probable glutamine synthetase; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG0174; Belongs to the glutamine synthetase family.
  
  
 0.656
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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