Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CV_3872Hypothetical protein. (342 aa)    
Predicted Functional Partners:
CV_3133
Probable flagellar protein FliJ; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG2882.
 
  
 0.947
CV_3128
Probable Flagellar protein FliO; Identified by sequence similarity; putative; ORF located using Blastx/TC:3.A.6.1.2.
 
  
 0.931
flgJ
Flagellar protein flgJ; Identified by sequence similarity; putative; ORF located using Blastx/COG1705.
  
  
 0.928
CV_3871
Probable flagellar biosynthesis-related protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2257.
 
  
 0.899
CV_3875
Probable flagellar protein FliS; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1516.
  
  
 0.868
fliL
Flagellar fliL transmembrane protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.866
fliF1
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.852
fliE
Flagellar hook-basal body complex protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1677.
 
  
 0.840
flhF
Flagellar biosynthetic protein FlhF; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1419.
 
  
 0.815
ycgR
Conserved hypothetical protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.
 
  
 0.802
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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