CV_3875 protein (Chromobacterium violaceum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CV_3875

Probable flagellar protein FliS; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1516. (145 aa)

Predicted Functional Partners:

fliC3

0.986

flgL1

0.983

fliC1

0.983

fliC2

0.977

flaD

0.974

CV_3876

0.973

flgM

0.967

flgK1

0.959

flgL2

0.954

flaG

0.953

Your Current Organism:

Chromobacterium violaceum

NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CV_3875	CV_3876	CV_3875	CV_3876	Probable flagellar protein FliS; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1516.	Probable flagellar protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	0.973
CV_3875	flaD	CV_3875	CV_3011	Probable flagellar protein FliS; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1516.	Flagellin D; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.974
CV_3875	flaG	CV_3875	CV_3877	Probable flagellar protein FliS; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1516.	Flagellin protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1334.	0.953
CV_3875	flgK1	CV_3875	CV_2879	Probable flagellar protein FliS; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1516.	Flagellar hook-associated protein 1; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1256.	0.959
CV_3875	flgL1	CV_3875	CV_2878	Probable flagellar protein FliS; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1516.	Flagellar hook-associated protein 3; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1344.	0.983
CV_3875	flgL2	CV_3875	CV_1710	Probable flagellar protein FliS; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1516.	Flagellar hook-associated protein 3; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1344.	0.954
CV_3875	flgM	CV_3875	CV_1000	Probable flagellar protein FliS; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1516.	Negative regulator of flagellin synthesis; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2747.	0.967
CV_3875	fliC1	CV_3875	CV_3879	Probable flagellar protein FliS; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1516.	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.983
CV_3875	fliC2	CV_3875	CV_2495	Probable flagellar protein FliS; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1516.	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.977
CV_3875	fliC3	CV_3875	CV_3878	Probable flagellar protein FliS; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1516.	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.986
CV_3876	CV_3875	CV_3876	CV_3875	Probable flagellar protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	Probable flagellar protein FliS; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1516.	0.973
CV_3876	flaD	CV_3876	CV_3011	Probable flagellar protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	Flagellin D; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.943
CV_3876	flaG	CV_3876	CV_3877	Probable flagellar protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	Flagellin protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1334.	0.958
CV_3876	flgK1	CV_3876	CV_2879	Probable flagellar protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	Flagellar hook-associated protein 1; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1256.	0.979
CV_3876	flgL1	CV_3876	CV_2878	Probable flagellar protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	Flagellar hook-associated protein 3; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1344.	0.978
CV_3876	flgL2	CV_3876	CV_1710	Probable flagellar protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	Flagellar hook-associated protein 3; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1344.	0.917
CV_3876	flgM	CV_3876	CV_1000	Probable flagellar protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	Negative regulator of flagellin synthesis; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2747.	0.815
CV_3876	fliC1	CV_3876	CV_3879	Probable flagellar protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.964
CV_3876	fliC2	CV_3876	CV_2495	Probable flagellar protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.948
CV_3876	fliC3	CV_3876	CV_3878	Probable flagellar protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.973

page 1 of 5

Server load: low (38%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2026

Credits

Access

Info

About