Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ddhAGlucose-1-phosphate cytidylyltransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1208. (256 aa)    
Predicted Functional Partners:
rfbG
CDPglucose 4,6-dehydratase; Identified by sequence similarity; putative; ORF located using Blastx/COG0451.
 0.998
rfbC
dTDP-6-deoxy-D-glucose-3,5 epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.958
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.957
rfbH
CDP-6deoxy-D-xylo-4-hexulose-3-dehydrase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0399; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.953
algC
Phosphomannomutase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1109.
  
 
 0.945
galU
UTP-glucose-1-phosphate uridylyltransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1210.
    
 0.922
manC
Mannose-1-phosphate guanylyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/COG0662; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.921
ubiB
NAD(P)H-flavin reductase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0543/TC:3.D.5.1.1.
  
  
 0.881
CV_0819
Probable nucleotide sugar epimerase; Identified by sequence similarity; putative; ORF located using Blastx/COG0451.
  
 0.879
CV_3888
Probable methyltransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0500.
 
   
 0.874
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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