STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CV_3945Probable glutathione-dependent aldehyde dehydrogenase; Identified by sequence similarity; putative; ORF located using Blastx/COG1063. (348 aa)    
Predicted Functional Partners:
FadH
2,4-dienoyl-CoA reductase; Identified by sequence similarity; putative; ORF located using Blastx/COG0446.
  
  
 0.788
CV_3947
Probable 3-oxoacyl-(acyl-carrier protein) reductase; Identified by sequence similarity; putative; ORF located using Blastx/COG1028.
  
  
 0.774
CV_3944
Probable 3-hydroxyisobutyrate dehydrogenase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2084.
       0.773
CV_3948
Probable 3-oxoacyl-[acyl-carrier-protein] synthase II; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0304; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.572
CV_3949
Probable 3-oxoacyl-[acyl-carrier-protein] synthase II; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0304; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.572
adhC
Alcohol dehydrogenase class III; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1062; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
  
 0.547
CV_3942
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0577/TC:3.A.1.125.1.
       0.541
CV_3943
Probable ATP-binding component of ABC transporter; Identified by sequence similarity; putative; ORF located using Blastx/COG1136.
       0.541
CV_3950
Probable (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0764.
     
 0.540
CV_3951
Hypothetical protein.
       0.537
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.